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Evaluation of an automated LC-MS/MS system for
       analyzing hydrophilic blood metabolites





          Introduction


          Recently, metabolomics has been developed and applied to   biomarkers, a simple and quick automated sample
          a variety of research  elds, such as the food science,   preparation method involving metabolite extraction and
          agriculture, engineering, and medical  elds. In the medical   metabolite measurement should be developed. In this
          research  eld, metabolomics is used to search for novel   study, we assessed whether the plasma levels of
          metabolite biomarkers of a variety of diseases and    metabolites could be quantitatively measured using a fully
          elucidate pathogenic mechanisms, etc., and there have   automatic pre-treatment system for LC/MS that can be
          been a considerable number of metabolite biomarker    connected online to an LC/MS device.
          studies. As a step toward the practical use of metabolite






          Methods and Materials


          Reagents: Acetonitrile (LC/MS grade), formic acid (LC/MS   (Amicon Ultra 0.5-mL centrifugal  lters, Ultracel-3K). The
          grade) and methanol (MeOH; LC/MS grade) were          mixture was then centrifuged at 14,000 g for 60 min at
          purchased from Wako Pure Chemical Industries (Osaka,   4ºC, and the collected solution was subjected to the
          Japan). 2-Morpholinoethanesulfonic acid (MES), which was   LC/QqQMS-based analysis of L-valine, L-leucine,
          employed as an internal standard of primary metabolites,   L-isoleucine, L-tyrosine, and L-phenylalanine.
          was purchased from Sigma Aldrich. L-valine, L-leucine,
          L-isoleucine, L-tyrosine, and L-phenylalanine were acquired   Automatic method: The automatic method used to
          from Sigma Aldrich (MO, USA). Isotopically labeled L-valine   analyze L-valine, L-leucine, L-isoleucine, L-tyrosine,
          (D 8 ), L-leucine ( C 6 ), L-isoleucine (D 10 ), L-tyrosine ( C 9 ,  N),   L-phenylalanine levels was performed using an CLAM-2000
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                      13
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          and L-phenylalanine (D8) were purchased from Cambridge   (Shimadzu Corporation, Kyoto, Japan). In the CLAM-2000,
          Isotope Laboratories (MA, USA). Commercially available   MeOH containing 10 µM isotopically labeled L-valine,
          pooled plasma (Kohjin-Bio Co., Saitama, Japan), which was   L-leucine, L-isoleucine, L-tyrosine, L-phenylalanine and MES
          collected using EDTA-Na as an anticoagulant, was utilized   (as internal standards) was added into the solvent
          as human plasma, and pooled plasma with the same lot   container, and 20  L of plasma (N=5) were also applied
          number was used for all experiments.                  into another tubes. By running the CLAM-2000, 20  L of
                                                                plasma were automatically mixed with 230  L of MeOH
          Manual method: 20  L of plasma (N=5) were mixed with   and the internal standards, before the resultant mixture
          230  L of MeOH containing 10 µM isotopically labeled   was shaken at 1,900 rpm for 30 min at room temperature.
          L-valine, L-leucine, L-isoleucine, L-tyrosine, L-phenylalanine   Then, the mixture was automatically subjected to suction
          and MES as internal standards. Next, the mixture was    ltration for 90 sec, and the  ltered solution was
          shaken at 1,200 rpm for 30 min at room temperature,   transferred to an SIL-30AC autosampler online, before
          before being passed through an ultra ltration  lter   being subjected to LC/QqQMS analysis.


















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