Page 2 - LifeScience Multi-Omics Analysis Package
P. 2

The Multi-omics Analysis Package, developed for metabolic engineering applications, provides the ability to                                                  Data Analysis Example
            automatically generate metabolic maps and perform a variety of data analysis for the vast data generated in  elds
            like metabolomics, proteomics and  ux analysis. It offers a powerful platform to support drug discovery,                  Changes in metabolite levels in a cell culture medium over time were measured using a GC-MS system. Acquired data
            bioengineering and other life science research applications.
                                                                                                                                      was analyzed using the Multi-omics Analysis Package and metabolite changes were visualized by displaying them on a
                                                                                                                                      metabolic map.
            Automatically Visualize Quantitative Changes in Metabolites and Proteins on a
            Metabolic Map                                                                                                                        Experiment Protocol                    Load       Shimadzu  Blank Map (GML format)
                                                                                                                                                                                                   MS Data
            Dramatically reduces the amount of work required for bottleneck processes of analyzing and visualizing data,                                                                           Import                   Time Variation Data
            such as displaying data on a metabolic map and analyzing correlations.                                                          Culture MCF-7 cell line for 15 hours.  Metabolomes                         Data Mapping

            Works Perfectly with Software Developed by the World's Top Research Institutions                                             Replace culture medium with medium spiked                                         Data Mapping
                                                                                                                                                    with rotenone.
            In combination with various other software (called gadgets) connected on the GARUDA  platform, it offers
                                                                                          ™
            optimal work ows for multi-dimensional analyses.                                                                          Collect culture medium after 0, 3, 6, 9, and 24 hours.
                                                                                                                                                                                                           Discovery      Discovery
            Integrated Support for Operations from Data Acquisition to Analysis                                                       Use GC-MS system to measure metabolite quantities.                          Multiomics      VANTED
            The software includes various data processing gadgets which connect with corresponding data analysis gadgets,                                                                                         Data Mapper
            providing a seamless, connected experience of a single software program.                                                   Analyze data using Multi-omics Analysis Package.
            It is designed to work in combination with various Shimadzu databases prepared with "Ready-to-Use Methods"
            for everything from sample pretreatment to analytical conditions, which ensures the entire process  ow, from
            obtaining mass spectrometer measurements to data analysis, can be performed smoothly.






                                                                                                                                                                                                          GC-MS/MS


                                                        Q-TOF LCMS      LC-MS/MS         GC-MS/MS
                                                                                                                                                                                    Amino acids accumulate for three hours and then decrease
                                                     Multi-omics Data      Pathway Data
                      Visualization of Correlations  Metabolome Fluxome  Proteome Transcriptome  Metabolite ID  Reactions                          Lactic acid increases
                                                                                G6P ←→ F6P
                                        Text data  les
                                                                              C00041

                                           Correlation        Shimadzu MS           Blank GML
                                           Coef cient         Data Import           Generator
                                           Calculator


                                                                                                                                                 Malic acid increases
                                                                                    Multiomics                                                                                              Citric and isocitric acids increase
                                                              Volcano Plot
                                           Cytoscape                                Data
                                                              Generator
                                                                                    Mapper

                                                                                    VANTED







                                                                                                                                                Succinic acid temporarily accumulates






                                Comparison of Acquired Data                  Automatic Visualization on a Metabolic Map
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