Page 1 - LifeScience Multi-Omics Analysis Package

C146-E385A

Tools for Data Analysis

The Multi-omics Analysis Package is based on software tools (called gadgets) that have been released on the Multi-omics Analysis Package
GARUDA platform - an open research platform, developed by the GARUDA Alliance led by The Systems Biology
Institute, Japan (SBI).
LC/MS, GC/MS Data Analysis Software
Multi-omics Analysis Package
Data Analysis Tools Used in the Multi-omics Analysis Package

■Volcano Plot
A tool that combines a t-test (statistically signi cant difference) and a fold-change (Example:
Difference in mean value such as 2 times or 1/2) to visualize the differences between the two
groups. The Volcano Plot gadget developed by Shimadzu is included in the package.
■VANTED
Tool maintained at University of Konstanz, Germany, for visualization and analysis of networks
across different data sets. (GARUDA support was developed at Monash University)

■Cytoscape
Bioinformatics tool developed by the Cytoscape Consortium, used to visualize metabolic pathways,
to integrate gene expression pro les with related data, and so on. It is especially useful for
http://www.garuda-alliance.org/ analyzing networks and visualizing correlations.

Method Packages for Omics

■GC/MS, GC-MS/MS Method Package for Metabolites
Description Flyer code
Smart Metabolites Database ™ C146-E277
■LC/MS/MS Method Packages
Description Flyer code
Primary Metabolites C146-E227
Short Chain Fatty Acid C146-E355
Lipid Mediators C146-E381
D/L Amino Acids C146-E336
Cell Culture Pro ling C146-E408
■LC/MS/MS MRM Library
Description Flyer code
Metabolic Enzymes in Yeast C146-E275
Phospholipid Pro ling C146-E314

Smart Metabolites Database is a trademark of Shimadzu Corporation.
GARUDA is a trademark of The Systems Biology Institute.

For Research Use Only. Not for use in diagnostic procedures.
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© Shimadzu Corporation, 2020
First Edition: March 2019 3655-07025-ODPIT